Package: GoodFibes 1.0.0

GoodFibes: Detection and Reconstruction of Muscle Fibers from diceCT Image Data

Reconstruction of muscle fibers from image stacks using textural analysis. Includes functions for tracking, smoothing, cleaning, plotting and exporting muscle fibers. Also calculates basic fiber properties (e.g., length, angle and curvature).

Authors:Jessica Arbour [aut, cre]

GoodFibes_1.0.0.tar.gz
GoodFibes_1.0.0.zip(r-4.7-any)GoodFibes_1.0.0.zip(r-4.6-any)GoodFibes_1.0.0.zip(r-4.5-any)
GoodFibes_1.0.0.tgz(r-4.6-any)GoodFibes_1.0.0.tgz(r-4.5-any)
GoodFibes_1.0.0.tar.gz(r-4.7-any)GoodFibes_1.0.0.tar.gz(r-4.6-any)
GoodFibes_1.0.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
GoodFibes/json (API)

# Install 'GoodFibes' in R:
install.packages('GoodFibes', repos = c('https://jessica-arbour.r-universe.dev', 'https://cloud.r-project.org'))
Datasets:

On CRAN:

Conda:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

1.48 score 435 downloads 18 exports 129 dependencies

Last updated from:4cacf47fcc. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-develOK232
source / vignettesOK289
linux-releaseOK249
macos-releaseOK142
macos-oldrelOK121
windows-develOK118
windows-releaseOK114
windows-oldrelOK109
wasm-releaseOK196

Exports:check.overlapcolor.scalecrop.stackequalize.stackfiber.anglefiber.curvefiber.lengthsfibers.smoothedfind.endpointsfuse.fibersfuse.fibers.autogood.fibesmuscle.plotmuscle.plot.multimuscle.plot.stlquality.checksequencePlotthresholdPlot

Dependencies:abindbackportsbase64encbmpbootbroombslibcachemcarcarDataclassclassIntclicodetoolscolorspaceconcavemancowplotcpp11curldata.tableDBIDerivdiagramdigestdoBydownloaderdplyre1071evaluatefarverfastmapfontawesomeforecastFormulafracdifffsfuturefuture.applygenericsggplot2globalsgluegtablehighrhtmltoolshtmlwidgetsigraphimagerisobandjpegjquerylibjsonliteKernSmoothknitrlabelinglatticelavalifecyclelistenvlme4lmtestmagrittrMASSmatlibMatrixMatrixModelsmemoisemgcvmimeminqamodelrnlmenloptrnnetnumDerivparallellypbkrtestpillarpkgconfigpngprodlimprogressrproxypurrrquantregR6rappdirsrbibutilsRColorBrewerRcppRcppArmadilloRcppEigenRdpackreadbitmapreformulasrglrlangrmarkdownrstudioapis2S7sassscalessfshapeSparseMsplines2SQUAREMstringistringrsurvivaltibbletidyrtidyselecttifftimeDatetinytexunitsurcautf8V8vctrsviridisLitewithrwkxfunxtableyamlzoo